Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102345119Uncharacterized protein. (326 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.645
SLC30A8
Uncharacterized protein.
   
  
 0.644
TMEM230
Transmembrane protein 230.
      
 0.641
LYPLAL1
Lysophospholipase like 1.
      
 0.605
SLC35F1
Solute carrier family 35 member F1.
   
  
 0.604
SLC35A5
Solute carrier family 35 member A5.
   
  
 0.588
SLC35B4
Solute carrier family 35 member B4.
   
  
 0.584
SLC35C2
Solute carrier family 35 member C2.
   
  
 0.573
SLC35B3
Solute carrier family 35 member B3.
   
  
 0.559
PNKD
PNKD metallo-beta-lactamase domain containing.
      
 0.545
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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