Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D2BTBC1 domain family member 2B. (956 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.795
WDR90
WD repeat domain 90.
    
   0.741
LOC102352152
Uncharacterized protein.
    
 0.712
RAB31
RAB31, member RAS oncogene family.
    
 0.679
LOC102354290
Uncharacterized protein.
    
 
 0.630
H3B2K8_LATCH
Uncharacterized protein.
    
 0.593
TBC1D13
TBC1 domain family member 13.
      
 0.590
MEPCE
Methylphosphate capping enzyme.
      
 0.586
CFAP126
Cilia and flagella associated protein 126.
   
   0.576
LOC102360155
Uncharacterized protein.
   
 
 0.574
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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