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SCAMP2 protein (Latimeria chalumnae) - STRING interaction network
"SCAMP2" - Secretory carrier membrane protein 2 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAMP2Secretory carrier membrane protein 2 (259 aa)    
Predicted Functional Partners:
BCAP31
B-cell receptor-associated protein 31 (195 aa)
     
      0.593
PHB
Prohibitin (272 aa)
     
      0.592
ATP5L
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G (107 aa)
       
      0.590
ITSN2
Intersectin 2 (1704 aa)
     
   
  0.553
ENSLACG00000010044
Uncharacterized protein (1175 aa)
           
  0.550
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (447 aa)
     
      0.531
HDDC3
HD domain containing 3 (179 aa)
           
  0.454
JAGN1
Jagunal homolog 1 (Drosophila) (183 aa)
     
      0.450
ZCCHC4
Zinc finger, CCHC domain containing 4 (514 aa)
           
  0.442
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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