STRINGSTRING
PHAX protein (Latimeria chalumnae) - STRING interaction network
"PHAX" - Phosphorylated adaptor for RNA export in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHAXPhosphorylated adaptor for RNA export (404 aa)    
Predicted Functional Partners:
NCBP2
Nuclear cap binding protein subunit 2, 20kDa (164 aa)
     
  0.916
RAN
RAN, member RAS oncogene family; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (147 aa)
     
 
  0.811
ENSLACG00000015184
Uncharacterized protein (156 aa)
     
  0.793
NCBP1
Nuclear cap binding protein subunit 1, 80kDa (804 aa)
     
  0.778
SRRT
Serrate RNA effector molecule homolog (Arabidopsis) (832 aa)
     
 
  0.699
ENSLACG00000009728
Uncharacterized protein (3251 aa)
     
 
  0.631
ENSLACG00000004309
Uncharacterized protein (347 aa)
     
 
  0.631
DDX20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 (805 aa)
     
 
  0.594
NUCKS1
Nuclear casein kinase and cyclin-dependent kinase substrate 1 (295 aa)
     
      0.592
HUWE1
HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase (4101 aa)
     
      0.591
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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