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STRINGSTRING
DCAF12 protein (Latimeria chalumnae) - STRING interaction network
"DCAF12" - DDB1 and CUL4 associated factor 12 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF12DDB1 and CUL4 associated factor 12 (468 aa)    
Predicted Functional Partners:
NOL6
Nucleolar protein 6 (RNA-associated) (826 aa)
           
  0.832
UBE2R2
Ubiquitin-conjugating enzyme E2R 2; Belongs to the ubiquitin-conjugating enzyme family (238 aa)
     
 
  0.812
ENSLACG00000009726
Ddb1 and cul4 associated factor 11 (552 aa)
     
   
  0.768
DCAF4
Uncharacterized protein; WD repeat domain 21 (505 aa)
           
  0.745
DCAF5
DDB1 and CUL4 associated factor 5 (910 aa)
           
  0.732
ENSLACG00000007801
Uncharacterized protein (215 aa)
           
  0.703
DDB1
Damage-specific DNA binding protein 1, 127kDa (1142 aa)
       
 
  0.658
WDTC1
WD and tetratricopeptide repeats 1 (646 aa)
           
  0.647
ENSLACG00000007870
annotation not available (618 aa)
           
  0.647
FARP1
FERM, ARH/RhoGEF and pleckstrin domain protein 1 (1031 aa)
           
  0.646
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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