STRINGSTRING
ENSLACG00000001018 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001018" - Poly [ADP-ribose] polymerase in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001018Poly [ADP-ribose] polymerase (601 aa)    
Predicted Functional Partners:
ENSLACG00000003908
Uncharacterized protein (215 aa)
     
 
  0.614
ENSLACG00000003037
Uncharacterized protein (366 aa)
     
 
  0.614
PARP9
Poly (ADP-ribose) polymerase family, member 9 (804 aa)
 
 
 
0.600
H2AFY
H2A histone family, member Y; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes (370 aa)
       
  0.585
H2AFY2
H2A histone family, member Y2; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes (376 aa)
       
  0.554
ENSLACG00000004753
Uncharacterized protein (405 aa)
     
 
  0.451
H2AFX
H2A histone family, member X (142 aa)
       
  0.410
HIST2H2AB
Histone cluster 2, H2ab (135 aa)
       
  0.410
HIST1H2AA
Histone cluster 1, H2aa (133 aa)
       
  0.410
ENSLACG00000004762
Histone H2A (127 aa)
       
  0.410
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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