STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBL7Ubiquitin like 7. (297 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.984
ITSN2
Intersectin 2.
    
 0.970
NBR1
NBR1 autophagy cargo receptor.
   
 0.937
UBE2V2-2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.903
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.903
UBXN7
UBX domain-containing protein 7.
    
 0.901
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.889
RPS27A
Ribosomal protein S27a.
    
  0.880
TRAF7
TNF receptor associated factor 7.
    
 0.873
ADRM1
Adhesion regulating molecule 1.
   
 
 0.863
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.