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ABCD1 protein (Latimeria chalumnae) - STRING interaction network
"ABCD1" - ATP-binding cassette, sub-family D in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCD1ATP-binding cassette, sub-family D (ALD), member 1 (749 aa)    
Predicted Functional Partners:
PEX3
Peroxisomal biogenesis factor 3 (373 aa)
     
  0.863
PEX19
Peroxisomal biogenesis factor 19 (292 aa)
     
  0.806
ABCD3
ATP-binding cassette, sub-family D (ALD), member 3 (684 aa)
   
 
0.769
PEX5L
Peroxisomal biogenesis factor 5-like (563 aa)
     
   
  0.748
PEX5
Peroxisomal biogenesis factor 5 (666 aa)
     
   
  0.701
PEX11B
Peroxisomal biogenesis factor 11 beta (244 aa)
     
 
  0.697
PEX11A
Peroxisomal biogenesis factor 11 alpha (249 aa)
     
 
  0.688
PEX11G
Peroxisomal biogenesis factor 11 gamma (158 aa)
     
 
  0.688
RAD51
RAD51 homolog (S. cerevisiae) (341 aa)
     
 
  0.675
DMC1
DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast) (317 aa)
     
      0.672
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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