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ABCD1 protein (Latimeria chalumnae) - STRING interaction network
"ABCD1" - ATP-binding cassette, sub-family D in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCD1ATP-binding cassette, sub-family D (ALD), member 1 (749 aa)    
Predicted Functional Partners:
HTD2
Hydroxyacyl-thioester dehydratase type 2 (235 aa)
     
 
  0.824
SLC25A17
Solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family (268 aa)
     
 
  0.804
PEX3
Peroxisomal biogenesis factor 3 (373 aa)
     
 
  0.768
PEX19
Peroxisomal biogenesis factor 19 (292 aa)
     
 
  0.764
ENSLACG00000000392
Uncharacterized protein; ATP-binding cassette, sub-family D (ALD), member 4 (189 aa)
   
 
  0.732
ACOX2
acyl-CoA oxidase 2, branched chain; Belongs to the acyl-CoA oxidase family (618 aa)
     
   
  0.717
PEX13
Peroxisomal biogenesis factor 13 (381 aa)
     
 
  0.668
ACOX1
acyl-Coenzyme A oxidase 1, palmitoyl; Belongs to the acyl-CoA oxidase family (661 aa)
     
   
  0.664
PEX5L
Peroxisomal biogenesis factor 5-like (563 aa)
     
   
  0.655
PEX5
Peroxisomal biogenesis factor 5 (666 aa)
     
   
  0.655
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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