Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABCD1ATP binding cassette subfamily D member 1. (749 aa)    
Predicted Functional Partners:
PEX19
Peroxisomal biogenesis factor 19.
    
 0.941
ABCD3
ATP binding cassette subfamily D member 3.
  
0.926
PEX13
SH3 domain-containing protein.
   
 
 0.864
PEX3
Peroxisomal biogenesis factor 3.
   
 0.846
SLC25A17
Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.752
PEX2
Peroxisomal biogenesis factor 2.
    
 0.718
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.711
ACBD5
Acyl-CoA binding domain containing 5.
     
 0.708
GDAP1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
     
 0.701
PEX14
Peroxisomal biogenesis factor 14.
   
 0.695
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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