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STRINGSTRING
ENSLACG00000001043 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001043" - annotation not available in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001043annotation not available (136 aa)    
Predicted Functional Partners:
ENSLACG00000004350
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
 
 
 
  0.984
H3F3C
H3 histone, family 3C (109 aa)
     
 
0.949
BPTF
Bromodomain PHD finger transcription factor (3013 aa)
       
 
  0.936
H2AFV
H2A histone family, member V (149 aa)
 
 
 
  0.924
H2AFY
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes (370 aa)
 
 
 
  0.901
HIST2H2AB
Histone cluster 2, H2ab (135 aa)
 
 
 
  0.876
ENSLACG00000002753
Histone H2A (126 aa)
 
 
 
  0.876
CBX1
Chromobox homolog 1 (213 aa)
     
 
  0.867
H2AFY2
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes (376 aa)
 
 
 
  0.862
KDM1A
Lysine (K)-specific demethylase 1A (820 aa)
     
 
  0.853
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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