Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB11FIP4RAB11 family interacting protein 4. (530 aa)    
Predicted Functional Partners:
RAB11FIP3
RAB11 family interacting protein 3.
    
0.968
RAB11FIP1
RAB11 family interacting protein 1.
    
 
 0.870
LOC102357106
RAB11a, member RAS oncogene family, like.
    
 0.819
RAB11A
RAB11A, member RAS oncogene family.
    
 0.819
LOC102363089
RAB11B, member RAS oncogene family, b.
    
 0.819
RAB3IL1
RAB3A interacting protein like 1.
    
 0.819
EXOC7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.815
RAB11B
RAB11B, member RAS oncogene family.
    
 0.802
RAB25
RAB25, member RAS oncogene family.
    
 0.797
GSC
Goosecoid homeobox.
    
   0.794
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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