Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPN9Calpain 9; Belongs to the peptidase C2 family. (694 aa)    
Predicted Functional Partners:
LOC102356340
Uncharacterized protein.
   
 0.876
CAPNS1
Calpain small subunit 1.
   
 0.843
LOC102347576
SH3 domain-containing protein.
   
  
 0.585
XPO1
Exportin 1.
     
 0.564
C1QTNF12
C1q and TNF related 12.
      
 0.549
H3A0S5_LATCH
Uncharacterized protein.
    
 0.536
LOC102353252
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
  
 
0.529
INCENP
INCENP_ARK-bind domain-containing protein.
     
 0.500
MAD1L1
Mitotic arrest deficient 1 like 1.
   
 
  0.490
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
     
 0.489
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.