STRINGSTRING
ENSLACG00000001059 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001059" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001059Uncharacterized protein (319 aa)    
Predicted Functional Partners:
DDX52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 (615 aa)
     
        0.457
TBL3
Transducin (beta)-like 3 (803 aa)
     
        0.450
BMS1
BMS1 homolog, ribosome assembly protein (yeast) (1255 aa)
     
        0.447
PES1
Pescadillo ribosomal biogenesis factor 1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome (584 aa)
     
        0.414
PACSIN3
Protein kinase C and casein kinase substrate in neurons 3 (486 aa)
     
      0.409
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2 (330 aa)
     
      0.409
PACSIN1
Protein kinase C and casein kinase substrate in neurons 1 (490 aa)
     
      0.409
WDR46
WD repeat domain 46 (614 aa)
     
        0.406
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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