STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102346521Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (319 aa)    
Predicted Functional Partners:
PEX19
Peroxisomal biogenesis factor 19.
    
 0.556
TTC16
Tetratricopeptide repeat domain 16.
      
 0.550
PUM2
Pumilio RNA binding family member 2.
    
   0.500
PUM1
Pumilio RNA binding family member 1.
    
   0.500
NMNAT1
Nicotinamide-nucleotide adenylyltransferase.
      
 0.453
BOLA1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.453
SLC25A53
Solute carrier family 25 member 53; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.442
YME1L1
YME1 like 1 ATPase; Belongs to the AAA ATPase family.
      
 0.438
EDF1
Endothelial differentiation related factor 1.
    
   0.433
LOC102367325
HTH cro/C1-type domain-containing protein.
    
   0.433
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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