STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZUW3_LATCHUncharacterized protein. (448 aa)    
Predicted Functional Partners:
LOC102356325
Eph LBD domain-containing protein.
 
 
  0.914
H3A0R0_LATCH
Eph LBD domain-containing protein.
 
 
  0.911
H3AX34_LATCH
Eph LBD domain-containing protein.
 
   
  0.888
H3ARI7_LATCH
Eph LBD domain-containing protein.
 
      0.886
H3AU94_LATCH
Eph LBD domain-containing protein.
 
      0.882
EPHA3-2
Eph LBD domain-containing protein.
 
      0.878
H2ZU13_LATCH
SAM domain-containing protein.
 
     0.872
H3ADN2_LATCH
Eph LBD domain-containing protein.
 
      0.861
EFNB2
Ephrin B2; Belongs to the ephrin family.
   
 0.747
EFNA2
Ephrin A2; Belongs to the ephrin family.
   
 0.706
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.