• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
EPCAM protein (Latimeria chalumnae) - STRING interaction network
"EPCAM" - Epithelial cell adhesion molecule in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPCAMEpithelial cell adhesion molecule (313 aa)    
Predicted Functional Partners:
CDH1
Cadherin 31; Cadherins are calcium-dependent cell adhesion proteins (829 aa)
     
   
  0.804
PROM1
Prominin 1 (603 aa)
     
   
  0.738
CD44
Uncharacterized protein; CD44 molecule (Indian blood group) (405 aa)
     
   
  0.733
NLK
Mitogen-activated protein kinase; Nemo-like kinase (382 aa)
           
  0.685
CLDN1
Claudin 7b (210 aa)
     
 
  0.665
RAB13
RAB13, member RAS oncogene family (178 aa)
           
  0.648
UTP3
UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) (496 aa)
           
  0.647
RRS1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (329 aa)
           
  0.646
PTPRC
Protein tyrosine phosphatase, receptor type, C (830 aa)
           
  0.646
UBIAD1
UbiA prenyltransferase domain containing 1 (368 aa)
           
  0.645
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (13%) [HD]