STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPC1Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (552 aa)    
Predicted Functional Partners:
NOTUM
Notum, palmitoleoyl-protein carboxylesterase.
    
 0.704
SDC4
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.679
EXTL3
Exostosin like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
     
 0.640
HS2ST1
Heparan sulfate 2-O-sulfotransferase 1b.
    
 0.623
SLIT1
Slit guidance ligand 1.
    
 0.590
H3AGE3_LATCH
Uncharacterized protein.
      
 0.563
SRGAP1
SLIT-ROBO Rho GTPase activating protein 1.
      
 0.557
MUSK
Muscle associated receptor tyrosine kinase.
      
 0.547
H3AZB0_LATCH
Glypican 5c; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.545
GPC3
Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.545
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.