STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB1SUB1 regulator of transcription. (65 aa)    
Predicted Functional Partners:
SYMPK
Symplekin.
    
 
 0.938
GTF2B
General transcription factor IIB.
   
 
 0.703
POMP
Proteasome maturation protein.
   
  
 0.584
C11orf58
Chromosome 11 open reading frame 58.
   
    0.573
SUPT5H
Transcription elongation factor SPT5.
    
 
 0.552
ARL6IP4
ADP ribosylation factor like GTPase 6 interacting protein 4.
      
 0.545
TMEM51
Transmembrane protein 51.
      
 0.497
H2ZXZ8_LATCH
Uncharacterized protein.
      
 0.497
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.495
CSTF2
Cleavage stimulation factor subunit 2.
    
 
 0.487
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.