Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H2ZUX7_LATCHDH domain-containing protein. (365 aa)    
Predicted Functional Partners:
H2ZSQ8_LATCH
Uncharacterized protein.
 
     0.945
H3AJJ8_LATCH
Rho guanine nucleotide exchange factor (GEF) 15.
     
 0.845
FBXO47
F-box protein 47.
      
 0.790
LOC102345131
Si:ch1073-416j23.1.
   
 
 0.748
RACGAP1
Rac GTPase activating protein 1.
   
 
 0.748
CCDC28A
Coiled-coil domain containing 28A.
 
 
  
 0.735
FBXO16
F-box protein 16.
 
 
    0.715
TRIO
Trio Rho guanine nucleotide exchange factor.
    
 0.668
FGD5
FYVE, RhoGEF and PH domain containing 5.
     
 0.649
ARHGEF19
Rho guanine nucleotide exchange factor 19.
     
 0.642
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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