STRINGSTRING
SEC22A protein (Latimeria chalumnae) - STRING interaction network
"SEC22A" - SEC22 vesicle trafficking protein homolog A (S. cerevisiae) in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22ASEC22 vesicle trafficking protein homolog A (S. cerevisiae) (304 aa)    
Predicted Functional Partners:
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (250 aa)
     
  0.955
GOSR2
Golgi SNAP receptor complex member 2 (213 aa)
     
  0.953
BET1L
Blocked early in transport 1 homolog (S. cerevisiae)-like (112 aa)
     
  0.951
STX5
Syntaxin 5 (350 aa)
     
  0.950
VAMP7
Vesicle-associated membrane protein 7 (220 aa)
     
 
  0.941
STX18
Syntaxin 18 (329 aa)
     
  0.934
SCFD1
Sec1 family domain containing 1 (632 aa)
     
  0.932
YKT6
YKT6 v-SNARE homolog (S. cerevisiae) (199 aa)
     
  0.927
USO1
USO1 vesicle docking protein homolog (yeast) (980 aa)
     
  0.923
NAPB
N-ethylmaleimide-sensitive factor attachment protein, beta (294 aa)
     
  0.921
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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