STRINGSTRING
RAB34 protein (Latimeria chalumnae) - STRING interaction network
RAB34, member RAS oncogene family in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB34RAB34, member RAS oncogene family (259 aa)    
Predicted Functional Partners:
VPS52
Vacuolar protein sorting 52 homolog (S. cerevisiae) (528 aa)
     
  0.908
KIAA1432
KIAA1432 (1414 aa)
     
  0.888
ENSLACG00000016997
Uncharacterized protein (446 aa)
     
 
  0.824
GDI1
GDP dissociation inhibitor 1 (448 aa)
     
 
  0.824
GDI2
GDP dissociation inhibitor 2 (403 aa)
     
 
  0.824
RABL6
RAB, member RAS oncogene family-like 6 (360 aa)
     
  0.759
COG8
Component of oligomeric golgi complex 8 (615 aa)
     
  0.759
COG3
Component of oligomeric golgi complex 3 (829 aa)
     
 
  0.751
COG6
Component of oligomeric golgi complex 6 (547 aa)
     
  0.721
ENSLACG00000003722
Uncharacterized protein (225 aa)
   
0.702
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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