STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC107RIC3 domain-containing protein. (311 aa)    
Predicted Functional Partners:
INTS2
Integrator complex subunit 2.
      
 0.642
H3AVY5_LATCH
SMAP domain-containing protein.
      
 0.585
UBALD2
UBA like domain containing 2.
      
 0.585
SAMD14
Sterile alpha motif domain containing 14.
    
 
 0.515
KLHL26
Kelch like family member 26.
    
 
 0.508
LOC102354290
Uncharacterized protein.
   
 
 0.499
TTC33
Tetratricopeptide repeat domain 33.
    
 
 0.495
DGCR2
DiGeorge syndrome critical region gene 2.
      
 0.469
CENPV
Centromere protein V.
      
 0.467
WDR90
WD repeat domain 90.
   
 
 0.467
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.