STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZUZ1_LATCHUncharacterized protein. (300 aa)    
Predicted Functional Partners:
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.544
H3ATL5_LATCH
Uncharacterized protein.
  
     0.471
H3ANM7_LATCH
DUF4371 domain-containing protein.
  
     0.461
H3AFS2_LATCH
DUF4371 domain-containing protein.
  
     0.452
H3AUA5_LATCH
DUF4371 domain-containing protein.
  
     0.442
H3ADQ8_LATCH
TTF-type domain-containing protein.
  
     0.438
WDR90
WD repeat domain 90.
    
 0.436
H2ZZP6_LATCH
DUF4371 domain-containing protein.
  
     0.413
H2ZU17_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.411
H2ZXT6_LATCH
DUF4371 domain-containing protein.
  
     0.403
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.