STRINGSTRING
WDR60 protein (Latimeria chalumnae) - STRING interaction network
"WDR60" - WD repeat domain 60 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR60WD repeat domain 60 (1044 aa)    
Predicted Functional Partners:
DYNC2LI1
Dynein, cytoplasmic 2, light intermediate chain 1 (362 aa)
     
 
    0.430
TTC21A
Tetratricopeptide repeat domain 21A (1299 aa)
     
 
    0.430
IFT80
Intraflagellar transport 80 (780 aa)
     
 
    0.430
TTC21B
Tetratricopeptide repeat domain 21B (1311 aa)
     
 
    0.430
WDR19
WD repeat domain 19 (895 aa)
     
 
    0.419
IFT140
Intraflagellar transport 140 homolog (Chlamydomonas) (1471 aa)
     
 
    0.417
WDR35
WD repeat domain 35 (1181 aa)
     
 
    0.409
KIF3A
Kinesin family member 3A (731 aa)
     
 
    0.400
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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