SRRT protein (Latimeria chalumnae) - STRING interaction network

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Score

SRRT

Serrate, RNA effector molecule. (832 aa)

Predicted Functional Partners:

ALYREF

0.993

NCBP1

0.993

MTREX

0.990

H3B5R9_LATCH

0.986

NCBP2

0.986

ZC3H18

0.985

PHAX

0.972

PRPF40A

0.954

ZFC3H1

0.946

H2ZZC6_LATCH

0.942

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALYREF	H2ZZC6_LATCH	ENSLACP00000006417	ENSLACP00000002747	Aly/REF export factor.	Sm domain-containing protein.	0.892
ALYREF	H3B5R9_LATCH	ENSLACP00000006417	ENSLACP00000017240	Aly/REF export factor.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.920
ALYREF	MTREX	ENSLACP00000006417	ENSLACP00000010303	Aly/REF export factor.	Mtr4 exosome RNA helicase.	0.979
ALYREF	NCBP1	ENSLACP00000006417	ENSLACP00000015848	Aly/REF export factor.	Nuclear cap binding protein subunit 1.	0.994
ALYREF	NCBP2	ENSLACP00000006417	ENSLACP00000019874	Aly/REF export factor.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.920
ALYREF	PHAX	ENSLACP00000006417	ENSLACP00000001122	Aly/REF export factor.	Phosphorylated adaptor for RNA export.	0.530
ALYREF	PRPF40A	ENSLACP00000006417	ENSLACP00000007530	Aly/REF export factor.	Pre-mRNA processing factor 40 homolog A.	0.865
ALYREF	SRRT	ENSLACP00000006417	ENSLACP00000001215	Aly/REF export factor.	Serrate, RNA effector molecule.	0.993
ALYREF	ZFC3H1	ENSLACP00000006417	ENSLACP00000002892	Aly/REF export factor.	Zinc finger C3H1-type containing.	0.606
H2ZZC6_LATCH	ALYREF	ENSLACP00000002747	ENSLACP00000006417	Sm domain-containing protein.	Aly/REF export factor.	0.892
H2ZZC6_LATCH	H3B5R9_LATCH	ENSLACP00000002747	ENSLACP00000017240	Sm domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.895
H2ZZC6_LATCH	NCBP1	ENSLACP00000002747	ENSLACP00000015848	Sm domain-containing protein.	Nuclear cap binding protein subunit 1.	0.963
H2ZZC6_LATCH	NCBP2	ENSLACP00000002747	ENSLACP00000019874	Sm domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.895
H2ZZC6_LATCH	PRPF40A	ENSLACP00000002747	ENSLACP00000007530	Sm domain-containing protein.	Pre-mRNA processing factor 40 homolog A.	0.568
H2ZZC6_LATCH	SRRT	ENSLACP00000002747	ENSLACP00000001215	Sm domain-containing protein.	Serrate, RNA effector molecule.	0.942
H2ZZC6_LATCH	ZC3H18	ENSLACP00000002747	ENSLACP00000009071	Sm domain-containing protein.	Zinc finger CCCH-type containing 18.	0.481
H3B5R9_LATCH	ALYREF	ENSLACP00000017240	ENSLACP00000006417	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Aly/REF export factor.	0.920
H3B5R9_LATCH	H2ZZC6_LATCH	ENSLACP00000017240	ENSLACP00000002747	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Sm domain-containing protein.	0.895
H3B5R9_LATCH	MTREX	ENSLACP00000017240	ENSLACP00000010303	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Mtr4 exosome RNA helicase.	0.939
H3B5R9_LATCH	NCBP1	ENSLACP00000017240	ENSLACP00000015848	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Nuclear cap binding protein subunit 1.	0.995