STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZV02_LATCHGlyco_tran_28_C domain-containing protein. (166 aa)    
Predicted Functional Partners:
ALG14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
   
 0.998
DPAGT1
Dolichyl-phosphate N-acetylglucosaminephosphotransferase 1.
   
 0.895
ALG1
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
    
 0.815
LOC102367350
Fibronectin type-III domain-containing protein.
   
 0.814
H3B2K8_LATCH
Uncharacterized protein.
    
   0.714
ALG11
ALG11 alpha-1,2-mannosyltransferase.
    
 0.685
ALG2
ALG2 alpha-1,3/1,6-mannosyltransferase.
    
 0.680
H3A4D8_LATCH
Uncharacterized protein.
   
 0.640
NUDT18
Nudix hydrolase 18; Belongs to the Nudix hydrolase family.
      
 0.638
DPM1
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
     
 0.627
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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