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TRPC6 protein (Latimeria chalumnae) - STRING interaction network
"TRPC6" - Transient receptor potential cation channel, subfamily C, member 6 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPC6Transient receptor potential cation channel, subfamily C, member 6 (697 aa)    
Predicted Functional Partners:
STIM1
Stromal interaction molecule 1 (662 aa)
       
  0.593
TRPM2
Transient receptor potential cation channel, subfamily M, member 2 (1473 aa)
     
 
  0.577
ACTN1
Actinin, alpha 1 (890 aa)
       
  0.563
ACTN3
Actinin, alpha 3 (907 aa)
       
  0.563
ACTN2
Actinin, alpha 2 (879 aa)
       
  0.563
STIM2
Stromal interaction molecule 2 (639 aa)
       
  0.561
NPHS2
Nephrosis 2, idiopathic, steroid-resistant (podocin) (398 aa)
     
  0.539
TRPM3
Transient receptor potential cation channel, subfamily M, member 3 (1326 aa)
     
 
  0.522
TRPV4
Transient receptor potential cation channel, subfamily V, member 4 (870 aa)
     
   
  0.518
TRPA1
Transient receptor potential cation channel, subfamily A, member 1 (1138 aa)
     
   
  0.517
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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