STRINGSTRING
ENSLACG00000001101 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001101" - Uncharacterized protein in Latimeria chalumnae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001101Uncharacterized protein (59 aa)    
Predicted Functional Partners:
SYNJ2
Synaptojanin 2 (1075 aa)
     
  0.644
SYNJ1
Synaptojanin 1 (1563 aa)
     
  0.644
LRRK2
Leucine-rich repeat kinase 2 (2508 aa)
     
  0.564
COPG1
Coatomer protein complex, subunit gamma 1; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (879 aa)
     
  0.493
COPG2
Coatomer protein complex, subunit gamma 2; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (873 aa)
     
  0.493
COPA
Coatomer protein complex, subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1224 aa)
     
  0.448
KIF13A
Kinesin family member 13A (1741 aa)
     
    0.425
RAD54B
RAD54 homolog B (S. cerevisiae) (2005 aa)
     
  0.417
COPB2
Coatomer protein complex, subunit beta 2 (beta prime) (919 aa)
     
  0.416
KXD1
Ubiquitin A-52 residue ribosomal protein fusion product 1 (231 aa)
     
    0.404
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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