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STRINGSTRING
SKA1 protein (Latimeria chalumnae) - STRING interaction network
"SKA1" - Spindle and kinetochore associated complex subunit 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA1Spindle and kinetochore associated complex subunit 1 (255 aa)    
Predicted Functional Partners:
SKA3
Uncharacterized protein; Spindle and kinetochore associated complex subunit 3 (444 aa)
     
 
  0.989
SKA2
Spindle and kinetochore associated complex subunit 2 (249 aa)
     
 
  0.958
NDC80
NDC80 kinetochore complex component (661 aa)
     
 
  0.945
SGOL1
Uncharacterized protein; Shugoshin-like 1 (S. pombe) (672 aa)
     
   
  0.930
CENPE
Centromere protein E, 312kDa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (397 aa)
     
 
  0.913
ASPM
Asp (abnormal spindle) homolog, microcephaly associated (Drosophila) (2977 aa)
     
   
  0.911
CDK1
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily (302 aa)
     
   
  0.882
ENSLACG00000014936
annotation not available (279 aa)
     
 
  0.877
ENSLACG00000001099
Aurora kinase B; Belongs to the protein kinase superfamily (278 aa)
     
 
  0.877
KIF11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1059 aa)
     
 
  0.874
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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