STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SKA1Spindle and kinetochore associated complex subunit 1. (255 aa)    
Predicted Functional Partners:
SKA2
Spindle and kinetochore associated complex subunit 2.
    
 0.998
SKA3
Spindle and kinetochore associated complex subunit 3.
   
 0.995
H3A0V9_LATCH
DUF5595 domain-containing protein.
   
 0.959
PPP2R2C
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.946
KIF11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.940
NUDC
Nuclear distribution C, dynein complex regulator.
     
  0.930
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 
 0.928
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
   
 
 0.927
H3AH17_LATCH
Shugoshin_C domain-containing protein.
   
 
 0.925
PLK1
Serine/threonine-protein kinase PLK.
   
 
 0.903
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.