STRINGSTRING
SKA1 protein (Latimeria chalumnae) - STRING interaction network
"SKA1" - Spindle and kinetochore associated complex subunit 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA1Spindle and kinetochore associated complex subunit 1 (255 aa)    
Predicted Functional Partners:
SKA2
Spindle and kinetochore associated complex subunit 2 (249 aa)
     
  0.964
NDC80
NDC80 kinetochore complex component homolog (S. cerevisiae) (661 aa)
     
  0.896
CENPE
Centromere protein E, 312kDa (397 aa)
     
  0.792
CENPI
Centromere protein I (701 aa)
     
 
  0.771
CDK1
Cyclin-dependent kinase 1 (302 aa)
     
 
    0.712
KIF11
Kinesin family member 11 (1059 aa)
     
  0.711
BUB1
Budding uninhibited by benzimidazoles 1 homolog (yeast) (1272 aa)
     
 
    0.709
FZR1
Fizzy/cell division cycle 20 related 1 (Drosophila) (493 aa)
     
 
    0.701
SGOL1
Shugoshin-like 1 (S. pombe) (672 aa)
     
 
    0.679
SPC25
SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) (232 aa)
     
 
  0.664
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (8%) [HD]