STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSTA3Tissue specific transplantation antigen P35B. (271 aa)    
Predicted Functional Partners:
GMDS
GDP-mannose 4,6-dehydratase.
 
 0.977
UBE2L6
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
 
 
   0.898
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.870
VSIG2
V-set and immunoglobulin domain containing 2.
      
 0.846
GALE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.740
RPS3A
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.679
RPS3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.673
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.673
RPS24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.671
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.667
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.