STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPDHAspartate dehydrogenase domain containing. (285 aa)    
Predicted Functional Partners:
GOT2
Aspartate aminotransferase.
     
 0.836
GOT1
Aspartate aminotransferase.
     
 0.812
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
     
 0.812
ASS1
Argininosuccinate synthase 1.
   
 
  0.807
ASPA
Aspartoacylase.
   
 
  0.802
LOC102367420
Amine oxidase.
     
  0.800
ASRGL1
Asparaginase and isoaspartyl peptidase 1.
     
  0.800
ADSS1
Adenylosuccinate synthetase isozyme 1; Component of the purine nucleotide cycle (PNC), which interconverts IMP and AMP to regulate the nucleotide levels in various tissues, and which contributes to glycolysis and ammoniagenesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
     
  0.800
LOC102355982
Amine oxidase.
     
  0.800
H3A2C6_LATCH
Amine oxidase.
     
  0.800
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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