Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102352108Uncharacterized protein. (271 aa)    
Predicted Functional Partners:
IGF2
Insulin like growth factor 2.
   
 0.750
GSG1L
Uncharacterized protein.
      
 0.659
ZAN
Zonadhesin (gene/pseudogene).
     
 0.658
DBN1
Drebrin 1.
      
 0.658
MMP15
Matrix metallopeptidase 15b.
    
 0.652
MMP14
Matrix metallopeptidase 14.
    
 0.652
ANAPC16
Anaphase promoting complex subunit 16.
      
 0.637
IGF1
Insulin like growth factor 1.
     
 0.627
IGFALS
Insulin like growth factor binding protein acid labile subunit.
    
 0.603
HIF1AN
Hypoxia inducible factor 1 subunit alpha inhibitor.
      
 0.591
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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