STRINGSTRING
CDH8 protein (Latimeria chalumnae) - STRING interaction network
"CDH8" - Cadherin 8, type 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH8Cadherin 8, type 2; Cadherins are calcium-dependent cell adhesion proteins (713 aa)    
Predicted Functional Partners:
CTNNB1
Catenin (cadherin-associated protein), beta 1, 88kDa (781 aa)
     
  0.777
JUP
Junction plakoglobin (694 aa)
     
  0.756
ARVCF
Armadillo repeat gene deleted in velocardiofacial syndrome (870 aa)
     
  0.736
CTNND1
Catenin (cadherin-associated protein), delta 1 (960 aa)
     
  0.736
PKP4
Plakophilin 4 (1190 aa)
     
  0.630
CTNND2
Catenin (cadherin-associated protein), delta 2 (534 aa)
     
  0.630
ENSLACG00000007293
Uncharacterized protein (511 aa)
     
  0.611
UCKL1
Uridine-cytidine kinase 1-like 1 (550 aa)
     
  0.611
ENSLACG00000014104
Uncharacterized protein (380 aa)
     
  0.604
CTNNA1
Catenin (cadherin-associated protein), alpha 1, 102kDa (911 aa)
     
  0.604
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (12%) [HD]