STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102353252Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (643 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
 
 
 0.904
LOC102356340
Uncharacterized protein.
   
 0.741
CAPN9
Calpain 9; Belongs to the peptidase C2 family.
  
 
0.529
CTSC
Cathepsin C; Belongs to the peptidase C1 family.
    
 
 0.525
CAPN10
Calpain 10; Belongs to the peptidase C2 family.
  
 
0.472
SRFBP1
Serum response factor binding protein 1.
      
 0.468
CAPN15
Calpain 15; Belongs to the peptidase C2 family.
     
0.452
ALG13
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.431
CAPN3
Calpain 3; Belongs to the peptidase C2 family.
    
 0.427
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.407
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.