• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
CRNKL1 protein (Latimeria chalumnae) - STRING interaction network
"CRNKL1" - Crooked neck pre-mRNA splicing factor 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRNKL1Crooked neck pre-mRNA splicing factor 1 (684 aa)    
Predicted Functional Partners:
XAB2
XPA binding protein 2 (848 aa)
     
0.995
SYF2
SYF2 pre-mRNA-splicing factor (238 aa)
     
  0.994
CDC5L
Cell division cycle 5-like (803 aa)
     
 
  0.989
SNW1
SNW domain containing 1 (536 aa)
     
 
  0.989
EFTUD2
Elongation factor Tu GTP binding domain containing 2 (971 aa)
     
 
  0.981
PRPF19
pre-mRNA processing factor 19 (504 aa)
     
 
  0.978
CDC40
Cell division cycle 40 (574 aa)
     
 
  0.976
PLRG1
Pleiotropic regulator 1 (514 aa)
     
 
  0.976
ISY1
ISY1 splicing factor homolog; RAB43, member RAS oncogene family (282 aa)
     
 
  0.972
AQR
Aquarius intron-binding spliceosomal factor (1464 aa)
     
 
  0.963
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (10%) [HD]