STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBXBBX high mobility group box domain containing. (951 aa)    
Predicted Functional Partners:
CREM
cAMP responsive element modulator.
      
 0.651
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.554
ATXN1L
Ataxin 1 like.
    
 
 0.553
ATXN1
Ataxin 1.
    
 
 0.553
POU1F1
POU domain protein.
   
  
 0.538
SIN3B
SIN3 transcription regulator family member B.
   
 
 0.523
SIN3A
SIN3 transcription regulator family member A.
   
 
 0.523
LAP3
Leucine aminopeptidase 3.
      
 0.509
TYR
Tyrosinase.
    
 
 0.505
IL17RD
Interleukin 17 receptor D.
      
 0.489
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.