STRINGSTRING
CACHD1 protein (Latimeria chalumnae) - STRING interaction network
"CACHD1" - Cache domain containing 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACHD1Cache domain containing 1 (1137 aa)    
Predicted Functional Partners:
TMEM125
Transmembrane protein 125 (220 aa)
           
  0.719
ATG4C
Autophagy related 4C, cysteine peptidase (456 aa)
           
  0.709
CACNB3
Calcium channel, voltage-dependent, beta 3 subunit (486 aa)
     
  0.704
CACNB2
Calcium channel, voltage-dependent, beta 2 subunit (548 aa)
     
  0.704
CACNB1
Calcium channel, voltage-dependent, beta 1 subunit (625 aa)
     
  0.704
CACNB4
Calcium channel, voltage-dependent, beta 4 subunit (477 aa)
     
  0.704
KANK4
KN motif and ankyrin repeat domains 4 (994 aa)
     
   
  0.694
TMEM53
Transmembrane protein 53 (282 aa)
           
  0.691
EFCAB7
EF-hand calcium binding domain 7 (631 aa)
     
   
  0.681
ALG6
Asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) (291 aa)
     
   
  0.659
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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