STRINGSTRING
DYM protein (Latimeria chalumnae) - STRING interaction network
"DYM" - Dymeclin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DYMDymeclin (473 aa)    
Predicted Functional Partners:
IKBIP
IKBKB interacting protein (379 aa)
           
  0.559
PAPSS2
3’-phosphoadenosine 5’-phosphosulfate synthase 2 (619 aa)
           
  0.545
PAPSS1
3’-phosphoadenosine 5’-phosphosulfate synthase 1 (603 aa)
           
  0.545
SEMA3B
semaphorin-3B (767 aa)
           
  0.463
SEMA3A
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A (635 aa)
           
  0.463
XPO1
Exportin 1 (CRM1 homolog, yeast) (1078 aa)
     
   
  0.443
CDC25C
Cell division cycle 25 homolog C (S. pombe) (561 aa)
     
   
  0.442
BARD1
BRCA1 associated RING domain 1 (866 aa)
     
   
  0.437
CUL1
Cullin 1 (776 aa)
     
   
  0.431
UBTF
Upstream binding transcription factor, RNA polymerase I (752 aa)
           
  0.429
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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