STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DYMDymeclin. (473 aa)    
Predicted Functional Partners:
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.813
HHIP
Hedgehog interacting protein.
      
 0.811
KCNT1
Potassium sodium-activated channel subfamily T member 1.
      
 0.806
SMAD7
Mothers against decapentaplegic homolog.
      
 0.689
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
   
  
 0.646
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
   
  
 0.646
WDR48
WD repeat domain 48.
      
 0.641
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.641
OIT3
Oncoprotein induced transcript 3.
      
 0.634
TSPAN4
Tetraspanin.
      
 0.631
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.