STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DYMDymeclin. (473 aa)    
Predicted Functional Partners:
KCNT1
Potassium sodium-activated channel subfamily T member 1.
      
 0.762
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.702
SMAD7
Mothers against decapentaplegic homolog.
      
 0.642
VPS50
VPS50 subunit of EARP/GARPII complex.
   
  
 0.611
HHIP
Hedgehog interacting protein.
      
 0.587
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.573
HID1
HID1 domain containing.
      
 0.552
ITGB1BP2
Integrin subunit beta 1 binding protein 2.
      
 0.551
BTBD7
BTB domain containing 7.
      
 0.546
MIF4GD
MIF4G domain containing.
      
 0.540
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.