STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAPSS13'-phosphoadenosine 5'-phosphosulfate synthase 1. (603 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase.
     
 0.980
FLAD1
Flavin adenine dinucleotide synthetase 1.
  
 0.958
IMPAD1
Inositol monophosphatase domain containing 1.
  
 
 0.952
LOC102349503
Uncharacterized protein.
  
 
 0.952
BPNT1
3'(2'), 5'-bisphosphate nucleotidase 1.
  
 
 0.952
LOC102346010
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
 
      0.900
LOC102356288
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
 
      0.900
HBS1L
HBS1 like translational GTPase.
 
      0.900
PAPSS2
3'-phosphoadenosine 5'-phosphosulfate synthase 2.
  
  
 
0.900
LOC102353631-2
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
 
      0.900
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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