STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX5Peroxisomal biogenesis factor 5. (666 aa)    
Predicted Functional Partners:
PEX14
Peroxisomal biogenesis factor 14.
   
 0.997
PEX7
Peroxisomal biogenesis factor 7.
    
 0.996
PEX13
SH3 domain-containing protein.
   
 0.990
NBR1
NBR1 autophagy cargo receptor.
    
 0.989
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.988
HSDL2
Hydroxysteroid dehydrogenase like 2.
   
 0.987
ECI2
Enoyl-CoA delta isomerase 2.
   
 0.980
PEX10
Peroxisomal biogenesis factor 10.
    
 0.974
AGXT
Serine--pyruvate aminotransferase.
    
 0.972
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.970
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.