STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102367488Uncharacterized protein. (178 aa)    
Predicted Functional Partners:
H3AL67_LATCH
Uncharacterized protein.
 
   
 0.937
H3A511_LATCH
Uncharacterized protein.
      
 0.546
MCIDAS
Multiciliate differentiation and DNA synthesis associated cell cycle protein.
      
 0.477
MN1
MN1 proto-oncogene, transcriptional regulator.
      
 0.473
LOC102364870
Uncharacterized protein.
      
 0.426
MEOX1
Mesenchyme homeobox 1.
      
 0.424
FOXN4
Forkhead box N4.
      
 0.418
TSPEAR
Thrombospondin type laminin G domain and EAR repeats.
      
 0.418
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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