STRINGSTRING
NGFR protein (Latimeria chalumnae) - STRING interaction network
"NGFR" - Nerve growth factor receptor in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGFRNerve growth factor receptor (197 aa)    
Predicted Functional Partners:
RIPK2
Receptor-interacting serine-threonine kinase 2 (567 aa)
       
  0.881
ARHGDIG
Rho GDP dissociation inhibitor (GDI) gamma (197 aa)
       
  0.874
ARHGDIA
Rho GDP dissociation inhibitor (GDI) alpha (204 aa)
       
  0.874
NGF
Nerve growth factor (beta polypeptide) (272 aa)
       
  0.851
ARHGDIB
Rho GDP dissociation inhibitor (GDI) beta (149 aa)
       
  0.759
LRRK1
Leucine-rich repeat kinase 1 (1987 aa)
     
  0.743
LRRK2
Leucine-rich repeat kinase 2 (2508 aa)
     
  0.743
ENSLACG00000004449
Uncharacterized protein (809 aa)
       
  0.722
SORT1
Sortilin 1 (734 aa)
       
  0.722
NTRK1
Neurotrophic tyrosine kinase, receptor, type 1 (747 aa)
     
  0.699
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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