STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPTXRNeuronal pentraxin receptor. (677 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
0.815
CBX4
Chromobox 4.
    
0.802
RNF2
Ring finger protein 2.
    
 0.793
RING1
Ring finger protein 1.
    
 0.793
PCGF2
Polycomb group ring finger 2.
    
 0.767
BMI1
Bmi1 polycomb ring finger oncogene 1b.
    
 0.767
PHC2
Polyhomeotic homolog 2.
    
 0.762
PHC1
Polyhomeotic homolog 1.
    
 0.762
PHC3
Polyhomeotic homolog 3.
    
 0.747
CBX2
Chromobox 2.
    
0.739
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.