Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIWIL4Piwi like RNA-mediated gene silencing 4. (579 aa)    
Predicted Functional Partners:
TDRKH
Tudor and KH domain containing.
   
 0.939
TDRD9
Tudor domain containing 9.
   
 0.899
TDRD1
Tudor domain containing 1.
   
 0.855
MOV10L1
Mov10 like RISC complex RNA helicase 1.
   
 0.800
GTSF1
Gametocyte specific factor 1.
   
 
 0.786
TDRD6
Tudor domain containing 6.
   
 0.783
TDRD15
Tudor domain containing 15.
   
 0.783
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.759
MOV10
Mov10 RISC complex RNA helicase.
   
 0.742
NANOS3
Nanos C2HC-type zinc finger 3; Belongs to the nanos family.
   
 
 0.727
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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