STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITFG1Integrin alpha FG-GAP repeat containing 1. (441 aa)    
Predicted Functional Partners:
HAUS2
HAUS augmin like complex subunit 2.
   
  
 0.835
NME4
Nucleoside diphosphate kinase.
    
 
 0.682
H3AF26_LATCH
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.
   
  
 0.642
MRPL19
Mitochondrial ribosomal protein L19.
      
 0.641
MRPL47
Mitochondrial ribosomal protein L47.
      
 0.641
SOGA1
Suppressor of glucose, autophagy associated 1.
      
 0.641
GPR22
G protein-coupled receptor 22.
      
 0.640
ANAPC2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
      
 0.629
POMP
Proteasome maturation protein.
      
 0.628
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.621
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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