STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102354227Arm_2 domain-containing protein. (317 aa)    
Predicted Functional Partners:
TMEM214
Transmembrane protein 214.
      
 0.552
CCDC69
Coiled-coil domain containing 69.
      
 0.543
TRMT11
tRNA methyltransferase 11 homolog.
      
 0.538
GAK
J domain-containing protein.
    
  0.480
HTT
Huntingtin.
   
 0.470
TRAK2
Trafficking kinesin protein 2.
     
 0.470
WDR90
WD repeat domain 90.
    
 0.469
H2ZU41_LATCH
Uncharacterized protein.
    
 0.467
LRRC19
Leucine rich repeat containing 19.
    
 0.467
TRIM16
Tripartite motif containing 16.
    
 0.459
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.