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IREB2 protein (Latimeria chalumnae) - STRING interaction network
"IREB2" - Iron-responsive element binding protein 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IREB2Iron-responsive element binding protein 2 (965 aa)    
Predicted Functional Partners:
ACLY
ATP citrate lyase (978 aa)
   
  0.967
CS
Citrate synthase (468 aa)
 
  0.879
IDH2
Isocitrate dehydrogenase 2 (NADP+), mitochondrial (402 aa)
   
  0.775
IDH1
Isocitrate dehydrogenase 1 (NADP+), soluble (414 aa)
   
  0.775
OGDH
Oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) (773 aa)
     
 
  0.748
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1 (931 aa)
     
 
  0.748
OGDHL
Oxoglutarate dehydrogenase-like (1017 aa)
     
 
  0.748
ALAS2
Aminolevulinate, delta-, synthase 2 (615 aa)
     
 
  0.709
IDH3B
Isocitrate dehydrogenase 3 (NAD+) beta (363 aa)
   
  0.673
ENSLACG00000008004
Uncharacterized protein (384 aa)
   
  0.673
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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