STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSMB6Proteasome subunit beta. (245 aa)    
Predicted Functional Partners:
PSMA4
Proteasome subunit alpha type.
   
 0.999
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
PSMB3
Proteasome subunit beta 3.
   
 0.999
PSMA2
Proteasome subunit alpha type.
   
 0.999
PSMA6
Proteasome subunit alpha type.
   
 0.999
PSMA3
Proteasome subunit alpha type.
   
 0.999
PSMC6
Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.
   
 0.999
PSMB1
Proteasome subunit beta.
   
 0.998
PSMA5
Proteasome subunit alpha type.
   
 0.998
PSMB2
Proteasome subunit beta.
   
 0.998
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.