Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102358653Tetraspanin. (149 aa)    
Predicted Functional Partners:
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.988
IGSF8
Immunoglobulin superfamily member 8.
    
 
 0.985
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
   
 0.954
CD81
Tetraspanin.
   
 
 0.949
CD63
Tetraspanin.
   
 
 0.949
ADAM10
ADAM metallopeptidase domain 10b.
    
 0.932
TSG101
Tumor susceptibility 101.
    
 
 0.929
H3AUC6_LATCH
Link domain-containing protein.
   
 
 0.867
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.804
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
   
 0.804
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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