Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CDH18Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins. (791 aa)    
Predicted Functional Partners:
BASP1
Brain abundant membrane attached signal protein 1.
      
 0.815
LOC102346231
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
0.804
LOC102354257
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
0.803
CDH6
Cadherin 6; Cadherins are calcium-dependent cell adhesion proteins.
  
0.802
CDH7
Cadherin 7; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 
0.802
CDH12
Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 
0.800
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 
0.797
CTNNB1
Catenin beta 1.
    
 0.793
SH3BP5L
SH3 binding domain protein 5 like.
      
 0.789
CDH1
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
  
 
0.787
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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