• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
DCN protein (Latimeria chalumnae) - STRING interaction network
"DCN" - Decorin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCNDecorin; May affect the rate of fibrils formation (353 aa)    
Predicted Functional Partners:
COL1A2
Collagen, type I, alpha 2 (1367 aa)
     
 
  0.955
LUM
Lumican (345 aa)
   
   
0.947
COL1A1
Collagen, type I, alpha 1 (1486 aa)
     
 
  0.945
MMP2
Matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase); Belongs to the peptidase M10A family (653 aa)
     
 
  0.924
COL3A1
Collagen, type III, alpha 1 (1467 aa)
     
 
  0.921
SPARC
Secreted protein, acidic, cysteine-rich (osteonectin) (304 aa)
     
   
  0.904
TGFB1
Transforming growth factor, beta 1 (401 aa)
       
  0.884
POSTN
Periostin, osteoblast specific factor (673 aa)
     
   
  0.879
FBN1
Fibrillin 1 (2872 aa)
     
 
  0.876
TGFB2
Transforming growth factor, beta 2 (415 aa)
     
  0.859
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (11%) [HD]