STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCNDecorin; May affect the rate of fibrils formation. (353 aa)    
Predicted Functional Partners:
LUM
Lumican.
  
  
0.959
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.937
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.935
LOC102352268
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.935
SPARC
Secreted protein acidic and cysteine rich.
   
  
 0.844
HSPG2
Heparan sulfate proteoglycan 2.
   
 
 0.827
H3B6I2_LATCH
Uncharacterized protein.
    
 0.825
ACAN
Aggrecan.
    
 0.813
FBN1
Fibrillin 1.
   
 0.807
TGFB1
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.803
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.