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STRINGSTRING
PTCHD1 protein (Latimeria chalumnae) - STRING interaction network
"PTCHD1" - Patched domain containing 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTCHD1Patched domain containing 1 (902 aa)    
Predicted Functional Partners:
RIPK4
Uncharacterized protein; Receptor-interacting serine-threonine kinase 4 (566 aa)
     
   
  0.789
NWD2
NACHT and WD repeat domain containing 2 (1643 aa)
     
   
  0.787
FICD
FIC domain containing (458 aa)
           
  0.785
ZRSR2
Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 (606 aa)
     
   
  0.784
DLGAP2
DLG associated protein 2; Discs, large (Drosophila) homolog-associated protein 2a (1003 aa)
     
   
  0.775
ENSLACG00000000944
Uncharacterized protein; Kelch-like 15 (Drosophila) (249 aa)
     
   
  0.775
PHKA2
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I; Belongs to the phosphorylase b kinase regulatory chain family (1215 aa)
     
   
  0.639
C18orf8
Chromosome 18 open reading frame 8 (658 aa)
           
  0.633
PANX2
Pannexin 2 (681 aa)
           
  0.600
KCTD21
Potassium channel tetramerization domain containing 21 (260 aa)
           
  0.588
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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